Программирование - скачать книги или читать онлайн. Страница 11

Introducing a handbook for gene regulatory network research using evolutionary computation, with applications for computer scientists, computational and system biologists This book is a step-by-step guideline for research in gene regulatory networks (GRN) using evolutionary computation (EC). The book is organized into four parts that deliver materials in a way equally attractive for a reader with training in computation or biology. Each of these sections, authored by well-known researchers and experienced practitioners, provides the relevant materials for the interested readers. The first part of this book contains an introductory background to the field. The second part presents the EC approaches for analysis and reconstruction of GRN from gene expression data. The third part of this book covers the contemporary advancements in the automatic construction of gene regulatory and reaction networks and gives direction and guidelines for future research. Finally, the last part of this book focuses on applications of GRNs with EC in other fields, such as design, engineering and robotics. • Provides a reference for current and future research in gene regulatory networks (GRN) using evolutionary computation (EC) • Covers sub-domains of GRN research using EC, such as expression profile analysis, reverse engineering, GRN evolution, applications • Contains useful contents for courses in gene regulatory networks, systems biology, computational biology, and synthetic biology • Delivers state-of-the-art research in genetic algorithms, genetic programming, and swarm intelligence Evolutionary Computation in Gene Regulatory Network Research is a reference for researchers and professionals in computer science, systems biology, and bioinformatics, as well as upper undergraduate, graduate, and postgraduate students. Hitoshi Iba is a Professor in the Department of Information and Communication Engineering, Graduate School of Information Science and Technology, at the University of Tokyo, Toyko, Japan. He is an Associate Editor of the IEEE Transactions on Evolutionary Computation and the journal of Genetic Programming and Evolvable Machines. Nasimul Noman is a lecturer in the School of Electrical Engineering and Computer Science at the University of Newcastle, NSW, Australia. From 2002 to 2012 he was a faculty member at the University of Dhaka, Bangladesh. Noman is an Editor of the BioMed Research International journal. His research interests include computational biology, synthetic biology, and bioinformatics.

Cluster or co-cluster analyses are important tools in a variety of scientific areas. The introduction of this book presents a state of the art of already well-established, as well as more recent methods of co-clustering. The authors mainly deal with the two-mode partitioning under different approaches, but pay particular attention to a probabilistic approach. Chapter 1 concerns clustering in general and the model-based clustering in particular. The authors briefly review the classical clustering methods and focus on the mixture model. They present and discuss the use of different mixtures adapted to different types of data. The algorithms used are described and related works with different classical methods are presented and commented upon. This chapter is useful in tackling the problem of co-clustering under the mixture approach. Chapter 2 is devoted to the latent block model proposed in the mixture approach context. The authors discuss this model in detail and present its interest regarding co-clustering. Various algorithms are presented in a general context. Chapter 3 focuses on binary and categorical data. It presents, in detail, the appropriated latent block mixture models. Variants of these models and algorithms are presented and illustrated using examples. Chapter 4 focuses on contingency data. Mutual information, phi-squared and model-based co-clustering are studied. Models, algorithms and connections among different approaches are described and illustrated. Chapter 5 presents the case of continuous data. In the same way, the different approaches used in the previous chapters are extended to this situation. Contents 1. Cluster Analysis. 2. Model-Based Co-Clustering. 3. Co-Clustering of Binary and Categorical Data. 4. Co-Clustering of Contingency Tables. 5. Co-Clustering of Continuous Data. About the Authors Gérard Govaert is Professor at the University of Technology of Compiègne, France. He is also a member of the CNRS Laboratory Heudiasyc (Heuristic and diagnostic of complex systems). His research interests include latent structure modeling, model selection, model-based cluster analysis, block clustering and statistical pattern recognition. He is one of the authors of the MIXMOD (MIXtureMODelling) software. Mohamed Nadif is Professor at the University of Paris-Descartes, France, where he is a member of LIPADE (Paris Descartes computer science laboratory) in the Mathematics and Computer Science department. His research interests include machine learning, data mining, model-based cluster analysis, co-clustering, factorization and data analysis. Cluster Analysis is an important tool in a variety of scientific areas. Chapter 1 briefly presents a state of the art of already well-established as well more recent methods. The hierarchical, partitioning and fuzzy approaches will be discussed amongst others. The authors review the difficulty of these classical methods in tackling the high dimensionality, sparsity and scalability. Chapter 2 discuss

As colour imaging takes on increasing importance in a range of products and technologies, colour fidelity across different media has become essential. This book has arisen from the need for a specialist text that brings together key developments in colour management technology and findings from the colour engineering research community. Edited by highly regarded specialists in colour management systems, Colour Engineering introduces the reader systematically to the art of constistent quality of image reproduction – regardless of the monitor or graphic user interface employed. Features: a thorough review of the elements of colour science that apply to colour imaging. a comprehensive analysis of methods for characterizing devices in the colour imaging chain. a review of the key topics in colour management. the different approaches to implementing colour systems at some of the leading exponents in the imaging industry. This authoritative book depicting the latest developments in colour imaging, written by a group of authors at the forefront of research in this exciting and fast-moving field will appeal to students as well as practitioners of the new discipline of colour engineering. The Society for Information Display (SID) is an international society, which has the aim of encouraging the development of all aspects of the field of information display. Complementary to the aims of the society, the Wiley-SID series is intended to explain the latest developments in information display technology at a professional level. The broad scope of the series addresses all facets of information displays from technical aspects through systems and prototypes to standards and ergonomics

The book provides an overview of the most advanced quantum informational geometric techniques, which can help quantum communication theorists analyze quantum channels, such as security or additivity properties. Each section addresses an area of major research of quantum information theory and quantum communication networks. The authors present the fundamental theoretical results of quantum information theory, while also presenting the details of advanced quantum ccommunication protocols with clear mathematical and information theoretical background. This book bridges the gap between quantum physics, quantum information theory, and practical engineering.

Big Data is a new field, with many technological challenges to be understood in order to use it to its full potential. These challenges arise at all stages of working with Big Data, beginning with data generation and acquisition. The storage and management phase presents two critical challenges: infrastructure, for storage and transportation, and conceptual models. Finally, to extract meaning from Big Data requires complex analysis. Here the authors propose using metaheuristics as a solution to these challenges; they are first able to deal with large size problems and secondly flexible and therefore easily adaptable to different types of data and different contexts. The use of metaheuristics to overcome some of these data mining challenges is introduced and justified in the first part of the book, alongside a specific protocol for the performance evaluation of algorithms. An introduction to metaheuristics follows. The second part of the book details a number of data mining tasks, including clustering, association rules, supervised classification and feature selection, before explaining how metaheuristics can be used to deal with them. This book is designed to be self-contained, so that readers can understand all of the concepts discussed within it, and to provide an overview of recent applications of metaheuristics to knowledge discovery problems in the context of Big Data.

Programming multi-core and many-core computing systems Sabri Pllana, Linnaeus University, Sweden Fatos Xhafa, Technical University of Catalonia, Spain Provides state-of-the-art methods for programming multi-core and many-core systems The book comprises a selection of twenty two chapters covering: fundamental techniques and algorithms; programming approaches; methodologies and frameworks; scheduling and management; testing and evaluation methodologies; and case studies for programming multi-core and many-core systems. Program development for multi-core processors, especially for heterogeneous multi-core processors, is significantly more complex than for single-core processors. However, programmers have been traditionally trained for the development of sequential programs, and only a small percentage of them have experience with parallel programming. In the past, only a relatively small group of programmers interested in High Performance Computing (HPC) was concerned with the parallel programming issues, but the situation has changed dramatically with the appearance of multi-core processors on commonly used computing systems. It is expected that with the pervasiveness of multi-core processors, parallel programming will become mainstream. The pervasiveness of multi-core processors affects a large spectrum of systems, from embedded and general-purpose, to high-end computing systems. This book assists programmers in mastering the efficient programming of multi-core systems, which is of paramount importance for the software-intensive industry towards a more effective product-development cycle. Key features: Lessons, challenges, and roadmaps ahead. Contains real world examples and case studies. Helps programmers in mastering the efficient programming of multi-core and many-core systems. The book serves as a reference for a larger audience of practitioners, young researchers and graduate level students. A basic level of programming knowledge is required to use this book.

Evolutionary computation algorithms are employed to minimize functions with large number of variables. Biogeography-based optimization (BBO) is an optimization algorithm that is based on the science of biogeography, which researches the migration patterns of species. These migration paradigms provide the main logic behind BBO. Due to the cross-disciplinary nature of the optimization problems, there is a need to develop multiple approaches to tackle them and to study the theoretical reasoning behind their performance. This book explains the mathematical model of BBO algorithm and its variants created to cope with continuous domain problems (with and without constraints) and combinatorial problems.

This book presents a substantial description of the principles and applications of digital holography. The first part of the book deals with mathematical basics and the linear filtering theory necessary to approach the topic. The next part describes the fundamentals of diffraction theory and exhaustively details the numerical computation of diffracted fields using FFT algorithms. A thorough presentation of the principles of holography and digital holography, including digital color holography, is proposed in the third part. A special section is devoted to the algorithms and methods for the numerical reconstruction of holograms. There is also a chapter devoted to digital holographic interferometry with applications in holographic microscopy, quantitative phase contrast imaging, multidimensional deformation investigations, surface shape measurements, fluid mechanics, refractive index investigations, synthetic aperture imaging and information encrypting. Keys so as to understand the differences between digital holography and speckle interferometry and examples of software for hologram reconstructions are also treated in brief. Contents 1. Mathematical Prerequisites. 2. The Scalar Theory of Diffraction. 3. Calculating Diffraction by Fast Fourier Transform. 4. Fundamentals of Holography. 5. Digital Off-Axis Fresnel Holography. 6. Reconstructing Wavefronts Propagated through an Optical System. 7. Digital Holographic Interferometry and Its Applications. Appendix. Examples of Digital Hologram Reconstruction Programs

This book provides an introduction to spatial analyses concerning disaggregated (or micro) spatial data. Particular emphasis is put on spatial data compilation and the structuring of the connections between the observations. Descriptive analysis methods of spatial data are presented in order to identify and measure the spatial, global and local dependency. The authors then focus on autoregressive spatial models, to control the problem of spatial dependency between the residues of a basic linear statistical model, thereby contravening one of the basic hypotheses of the ordinary least squares approach. This book is a popularized reference for students looking to work with spatialized data, but who do not have the advanced statistical theoretical basics.

Focuses on how to use web service computing and service-based workflow technologies to develop timely, effective workflows for both business and scientific fields Utilizing web computing and Service-Oriented Architecture (SOA), Business and Scientific Workflows: A Web Service–Oriented Approach focuses on how to design, analyze, and deploy web service–based workflows for both business and scientific applications in many areas of healthcare and biomedicine. It also discusses and presents the recent research and development results. This informative reference features application scenarios that include healthcare and biomedical applications, such as personalized healthcare processing, DNA sequence data processing, and electrocardiogram wave analysis, and presents: Updated research and development results on the composition technologies of web services for ever-sophisticated service requirements from various users and communities Fundamental methods such as Petri nets and social network analysis to advance the theory and applications of workflow design and web service composition Practical and real applications of the developed theory and methods for such platforms as personalized healthcare and Biomedical Informatics Grids The authors' efforts on advancing service composition methods for both business and scientific software systems, with theoretical and empirical contributions With workflow-driven service composition and reuse being a hot topic in both academia and industry, this book is ideal for researchers, engineers, scientists, professionals, and students who work on service computing, software engineering, business and scientific workflow management, the internet, and management information systems (MIS).

The Fundamental Science in «Computer Science» Is the Science of Thought For the first time, the collective genius of the great 18th-century German cognitive philosopher-scientists Immanuel Kant, Georg Wilhelm Friedrich Hegel, and Arthur Schopenhauer have been integrated into modern 21st-century computer science. In contrast to the languishing mainstream of Artificial Intelligence, this book takes the human thought system as its model, resulting in an entirely different approach. This book presents the architecture of a thoroughly and broadly educated human mind as translated into modern software engineering design terms. The result is The Autonomous System, based on dynamic logic and the architecture of the human mind. With its human-like intelligence, it is capable of rational thought, reasoning, and an understanding of itself and its tasks. «A system of thoughts must always have an architectural structure.» —Arthur Schopenhauer, The World as Will and Presentation

Nowadays, billions of lines of code are in the COBOL programming language. This book is an analysis, a diagnosis, a strategy, a MDD method and a tool to transform legacy COBOL into modernized applications that comply with Internet computing, Service-Oriented Architecture (SOA) and the Cloud. It serves as a blueprint for those in charge of finding solutions to this considerable challenge.